Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853596.1_cds_XP_016512300.1_24958
CDS Infomation

[gene=LOC107829341] [db_xref=GeneID:107829341] [protein=IQ domain-containing protein IQM4-like] [protein_id=XP_016512300.1] [location=complement(join(21307..21726,21859..21960,22049..22279,22397..22484,22590..22678,24260..24440,24630..24961))] [gbkey=CDS]
Sequence

ATGACAGTGATGAAAGAAAATGGTTTTAAAGGAACAGAATCAGAAACCATAATACAATCA
AATGGGGTTGATAAGATGTCAAGAAAGAATACAATAAATGTTAGAAATTGTGAGCCAATC
AAACTGATGCTTGAGACAACACTCTCATTCAAGAATTTGGTTCAAGAAACTAAGGCAAAA
TCAGATATTTCCTTTCCTGAGCCTGCTATTATGTTTTCTCCTCGACCAGTTAGCGAGCTT
GATGCTGCAGCTGTTAAGCTTCAAAAAGTATATAAGAGTTATAGGACTAGAAGAAATCTG
GCTGATTGTGCTGTTGTGGTTGAAGAATTATGGTGGAAGGCATTAGATTTTGCAGCTCTA
AAGAGAAGTTCAGTTTCATTTTTCAATGATGAGAAGCCAGAAACTGCTGTTTCAAGGTGG
GCTAGAGCACGTACTAGAGCTGCTAAAGTTGGAAAGGGATTGTCCAAAGATGAAAAAGCT
CAAAAATTGGCTCTGCAGCATTGGCTAGAAGCGATTGATCCACGACATCGGTATGGGCAC
AACTTGCACTTCTACTATGATTTATGGTTTAAGAGTGAAAGCTCTCAGCCTTTCTTCTAC
TGGTTGGATGTTGGAGATGGAAAAGAAATAAATCTAGAGAAATGTCCTAGGACAAAATTA
CACCATCAATGCATCAAATATCTTGGACCAAAGGAGCGCGAATCATATGAAGTAGTTATT
GAGAATGGGAAGCTTGTATATAAACAAAGTGGAGTTTCTGTTCAGTCAATAGAGGGTTCA
AAATGGATCTTTGTTCTTAGCACAACAAGAACATTATATGTAGGACAAAAGCAAAAGGGC
ACATTTCAACATTCAAGTTTTCTATCTGGTGGTGCTATCACTGCAGCTGGTAGACTAGTT
GCTCATGCTGGAATTCTAGAGGCTATTTGGCCATATAGTGGTCACTATCACCCAACTGAA
GAGAACTTCAGGGAATTCATTAGCTTTCTTGAAGAGCACAATGTCGACCTTACAAACGTT
AAGAGATGTGCAATTGATGATGACTATCATTCATTCAATGGTAGCAACGAGGGCTCAAAT
CGCCGACCACATGTGGATCCTTCCATTACTAAAGACTCTGAACAAAGAAGCACATACGTC
GACAAGAAACCGGAGGACATTATCATCAATGAGAAGGCACCAACATTTAGCTTGGCTAAA
CATTTGTCCAACAAATGGACAACTGGAACTGGACCGCGTATTGGCTGTGTTAGAGATTAC
CCTACAGAATTACAATTCCGAGCACTTGAACAAGTTAATTTATCGCCTCGGGTGGCCAAT
GTAGGCTTCAATTTCTCTGGTCCAATCCCCTCACCAAGACCAAGTCCAAAGATTAGGCTT
TCTCCAAGGATTGCACATATGGGACTGCCTAGTCCTCGGACTCCTATTTCAGCACCTAAT
TAA

Peptide Sequence

PEP ID

XP_016512300.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM4-like [Nicotiana tabacum]
Sequence

MTVMKENGFKGTESETIIQSNGVDKMSRKNTINVRNCEPIKLMLETTLSFKNLVQETKAK
SDISFPEPAIMFSPRPVSELDAAAVKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAAL
KRSSVSFFNDEKPETAVSRWARARTRAAKVGKGLSKDEKAQKLALQHWLEAIDPRHRYGH
NLHFYYDLWFKSESSQPFFYWLDVGDGKEINLEKCPRTKLHHQCIKYLGPKERESYEVVI
ENGKLVYKQSGVSVQSIEGSKWIFVLSTTRTLYVGQKQKGTFQHSSFLSGGAITAAGRLV
AHAGILEAIWPYSGHYHPTEENFREFISFLEEHNVDLTNVKRCAIDDDYHSFNGSNEGSN
RRPHVDPSITKDSEQRSTYVDKKPEDIIINEKAPTFSLAKHLSNKWTTGTGPRIGCVRDY
PTELQFRALEQVNLSPRVANVGFNFSGPIPSPRPSPKIRLSPRIAHMGLPSPRTPISAPN

Transcript Sequence

Gene sequence data has not been registered.